Index of /chuonglab/mia/hg38/2025_CUTnRUN_TEST/bw/


../
GM12878CTCFChIP_kim24.lessThan120_treat_pileup.bw  15-Dec-2025 19:08            33131821
GM12878CTCFChIP_kim24.moreThan120_treat_pileup.bw  15-Dec-2025 19:08           471930378
GM12878CTCFChIP_kim24.multi.bam.lessThan120_tre..> 09-Jan-2026 19:40            35081680
GM12878CTCFChIP_kim24.multi.bam.moreThan120_tre..> 09-Jan-2026 19:40           477115513
GM12878CTCFChIP_kim24_multi_treat_pileup.bw        09-Jan-2026 19:40           505432899
GM12878CTCFChIPrep1run1_zhang1.lessThan120_trea..> 15-Dec-2025 19:08              863146
GM12878CTCFChIPrep1run1_zhang1.moreThan120_trea..> 15-Dec-2025 19:08           172236163
GM12878CTCFChIPrep1run1_zhang1.multi.bam.lessTh..> 09-Jan-2026 19:40             1161949
GM12878CTCFChIPrep1run1_zhang1.multi.bam.moreTh..> 09-Jan-2026 19:40           181186782
GM12878CTCFChIPrep1run1_zhang1_multi_treat_pile..> 09-Jan-2026 19:40           183599772
GM12878CTCFChIPrep1run2_zhang18.lessThan120_tre..> 15-Dec-2025 19:08              681072
GM12878CTCFChIPrep1run2_zhang18.moreThan120_tre..> 15-Dec-2025 19:08           167043738
GM12878CTCFChIPrep1run2_zhang18.multi.bam.lessT..> 09-Jan-2026 19:40              918347
GM12878CTCFChIPrep1run2_zhang18.multi.bam.moreT..> 09-Jan-2026 19:40           177751177
GM12878CTCFChIPrep1run2_zhang18_multi_treat_pil..> 09-Jan-2026 19:41           176217198
GM12878CTCFChIPrep2_zhang18.lessThan120_treat_p..> 15-Dec-2025 19:08             1373161
GM12878CTCFChIPrep2_zhang18.moreThan120_treat_p..> 15-Dec-2025 19:09           262130649
GM12878CTCFChIPrep2_zhang18.multi.bam.lessThan1..> 09-Jan-2026 19:41             1938843
GM12878CTCFChIPrep2_zhang18.multi.bam.moreThan1..> 09-Jan-2026 19:41           280097382
GM12878CTCFChIPrep2_zhang18_multi_treat_pileup.bw  09-Jan-2026 19:41           279061540
GM12878WTIFNbH3K27ac_treat_pileup.bw               03-Feb-2026 20:16            94336391
GM12878WTIFNbH3K9me3_treat_pileup.bw               03-Feb-2026 20:16            72144102
GM12878WTIFNbIgG_treat_pileup.bw                   03-Feb-2026 20:16             4722609
GM12878WTUTH3K27ac_treat_pileup.bw                 03-Feb-2026 20:16            77244261
GM12878WTUTH3K9me3_treat_pileup.bw                 03-Feb-2026 20:16            81198981
GM12878WTUTigG_treat_pileup.bw                     03-Feb-2026 20:16            29156153
IFNb_chavez2025_rep1.lessThan120_treat_pileup.bw   12-Feb-2026 18:58            24900758
IFNb_chavez2025_rep1.moreThan120_treat_pileup.bw   12-Feb-2026 18:58            83579913
IFNb_chavez2025_rep1_treat_pileup.bw               12-Feb-2026 18:58            98714534
IFNb_chavez2025_rep2.lessThan120_treat_pileup.bw   12-Feb-2026 18:58            15236816
IFNb_chavez2025_rep2.moreThan120_treat_pileup.bw   12-Feb-2026 18:58            37446336
IFNb_chavez2025_rep2_treat_pileup.bw               12-Feb-2026 18:58            48779821
agkoloksuz_HFFc6_rep1.lessThan120_treat_pileup.bw  04-Feb-2026 19:30            27469025
agkoloksuz_HFFc6_rep1.moreThan120_treat_pileup.bw  04-Feb-2026 19:30           104229763
agkoloksuz_HFFc6_rep1_treat_pileup.bw              04-Feb-2026 19:30           124392197
agkoloksuz_HFFc6_rep2.lessThan120_treat_pileup.bw  04-Feb-2026 19:30            29700511
agkoloksuz_HFFc6_rep2.moreThan120_treat_pileup.bw  04-Feb-2026 19:30           125703662
agkoloksuz_HFFc6_rep2_treat_pileup.bw              04-Feb-2026 19:30           144443329
dave_ht29_20200219_minus_K27ac_S3.lessThan120_t..> 27-Jan-2026 20:49             2351511
dave_ht29_20200219_minus_K27ac_S3.moreThan120_t..> 27-Jan-2026 20:49            75625162
dave_ht29_20200219_minus_K27ac_S3_treat_pileup.bw  27-Jan-2026 20:49            76601161
dave_ht29_20200219_minus_K27me3_S1.lessThan120_..> 27-Jan-2026 20:49             1607862
dave_ht29_20200219_minus_K27me3_S1.moreThan120_..> 27-Jan-2026 20:49            94269459
dave_ht29_20200219_minus_K27me3_S1_treat_pileup.bw 27-Jan-2026 20:50            95872374
dave_ht29_20200219_minus_K9me3_S4.lessThan120_t..> 27-Jan-2026 20:50             2255928
dave_ht29_20200219_minus_K9me3_S4.moreThan120_t..> 27-Jan-2026 20:50            46412539
dave_ht29_20200219_minus_K9me3_S4_treat_pileup.bw  27-Jan-2026 20:50            48213863
dave_ht29_20200219_minus_Kap_S8.lessThan120_tre..> 27-Jan-2026 20:50            10366083
dave_ht29_20200219_minus_Kap_S8.moreThan120_tre..> 27-Jan-2026 20:50            59351917
dave_ht29_20200219_minus_Kap_S8_treat_pileup.bw    27-Jan-2026 20:50            68845924
dave_ht29_20200219_minus_PII_4_S6.lessThan120_t..> 27-Jan-2026 20:50             3012893
dave_ht29_20200219_minus_PII_4_S6.moreThan120_t..> 27-Jan-2026 20:50            65018577
dave_ht29_20200219_minus_PII_4_S6_treat_pileup.bw  27-Jan-2026 20:50            68129233
dave_ht29_20200219_minus_PII_8_S5.lessThan120_t..> 27-Jan-2026 20:50            10748350
dave_ht29_20200219_minus_PII_8_S5.moreThan120_t..> 27-Jan-2026 20:50            49611232
dave_ht29_20200219_minus_PII_8_S5_treat_pileup.bw  27-Jan-2026 20:50            60676224
dave_ht29_20200219_minus_Set_S7.lessThan120_tre..> 27-Jan-2026 20:50             2569226
dave_ht29_20200219_minus_Set_S7.moreThan120_tre..> 27-Jan-2026 20:50            11980995
dave_ht29_20200219_minus_Set_S7_treat_pileup.bw    27-Jan-2026 20:50            14292311
dave_ht29_20200219_plus_K27ac_S3.lessThan120_tr..> 27-Jan-2026 20:50             2615594
dave_ht29_20200219_plus_K27ac_S3.moreThan120_tr..> 27-Jan-2026 20:50            73461492
dave_ht29_20200219_plus_K27ac_S3_treat_pileup.bw   27-Jan-2026 20:50            75674465
dave_ht29_20200219_plus_K27me3_S1.lessThan120_t..> 27-Jan-2026 20:50             2155105
dave_ht29_20200219_plus_K27me3_S1.moreThan120_t..> 27-Jan-2026 20:50            92813482
dave_ht29_20200219_plus_K27me3_S1_treat_pileup.bw  27-Jan-2026 20:50            93847687
dave_ht29_20200219_plus_K9me3_S4.lessThan120_tr..> 27-Jan-2026 20:50             2538323
dave_ht29_20200219_plus_K9me3_S4.moreThan120_tr..> 27-Jan-2026 20:50            62782293
dave_ht29_20200219_plus_K9me3_S4_treat_pileup.bw   27-Jan-2026 20:50            65241998
dave_ht29_20200219_plus_Kap_S8.lessThan120_trea..> 27-Jan-2026 20:50             3123331
dave_ht29_20200219_plus_Kap_S8.moreThan120_trea..> 27-Jan-2026 20:50            12570654
dave_ht29_20200219_plus_Kap_S8_treat_pileup.bw     27-Jan-2026 20:50            15594872
dave_ht29_20200219_plus_PII_4_S6.lessThan120_tr..> 27-Jan-2026 20:50             4620837
dave_ht29_20200219_plus_PII_4_S6.moreThan120_tr..> 27-Jan-2026 20:50            76993819
dave_ht29_20200219_plus_PII_4_S6_treat_pileup.bw   27-Jan-2026 20:50            81781377
dave_ht29_20200219_plus_PII_8_S5.lessThan120_tr..> 27-Jan-2026 20:50             5250178
dave_ht29_20200219_plus_PII_8_S5.moreThan120_tr..> 27-Jan-2026 20:50            18532200
dave_ht29_20200219_plus_PII_8_S5_treat_pileup.bw   27-Jan-2026 20:50            23773949
dave_ht29_20200219_plus_Set_S7.lessThan120_trea..> 27-Jan-2026 20:50             2166438
dave_ht29_20200219_plus_Set_S7.moreThan120_trea..> 27-Jan-2026 20:50            10737906
dave_ht29_20200219_plus_Set_S7_treat_pileup.bw     27-Jan-2026 20:50            12648936
hct116_cnr_4_IFNG_CTCF.lessThan120_treat_pileup.bw 22-Jan-2026 17:37            35960662
hct116_cnr_4_IFNG_CTCF.moreThan120_treat_pileup.bw 22-Jan-2026 17:37           132000562
hct116_cnr_4_IFNG_CTCF.multi.bam.lessThan120_tr..> 14-Jan-2026 20:50            40704452
hct116_cnr_4_IFNG_CTCF.multi.bam.moreThan120_tr..> 14-Jan-2026 20:50           136709016
hct116_cnr_4_IFNG_CTCF.multi.treat_pileup.bw       23-Jan-2026 19:30           172086464
hct116_cnr_4_IFNG_CTCF.treat_pileup.bw             23-Jan-2026 19:32           162264529
hct116_cnr_4_IFNG_CTCF_treat_pileup.bw             14-Jan-2026 20:50           172086464
hct116_cnr_4_IFNG_H3K27me3.lessThan120_treat_pi..> 22-Jan-2026 17:37            25515094
hct116_cnr_4_IFNG_H3K27me3.moreThan120_treat_pi..> 22-Jan-2026 17:37           226554944
hct116_cnr_4_IFNG_H3K27me3.multi.bam.lessThan12..> 14-Jan-2026 20:50            26675882
hct116_cnr_4_IFNG_H3K27me3.multi.bam.moreThan12..> 14-Jan-2026 20:51           232297689
hct116_cnr_4_IFNG_H3K27me3.multi.treat_pileup.bw   23-Jan-2026 19:30           250363784
hct116_cnr_4_IFNG_H3K27me3_treat_pileup.bw         14-Jan-2026 20:51           250363784
hct116_cnr_4_IFNG_fresh_H3K27ac.lessThan120_tre..> 22-Jan-2026 17:37            26279667
hct116_cnr_4_IFNG_fresh_H3K27ac.moreThan120_tre..> 22-Jan-2026 17:37           152933938
hct116_cnr_4_IFNG_fresh_H3K27ac.multi.bam.lessT..> 14-Jan-2026 20:51            28797503
hct116_cnr_4_IFNG_fresh_H3K27ac.multi.bam.moreT..> 14-Jan-2026 20:51           157479978
hct116_cnr_4_IFNG_fresh_H3K27ac.multi.treat_pil..> 23-Jan-2026 19:30           182778486
hct116_cnr_4_IFNG_fresh_H3K27ac.treat_pileup.bw    23-Jan-2026 19:32           174323607
hct116_cnr_4_IFNG_fresh_H3K27ac_treat_pileup.bw    14-Jan-2026 20:51           182778486
henikoffcutnrunbiorep1.lessThan120_treat_pileup.bw 15-Dec-2025 21:58             7406263
henikoffcutnrunbiorep1.lessThan150_treat_pileup.bw 15-Dec-2025 21:58             9186963
henikoffcutnrunbiorep1.moreThan120_treat_pileup.bw 15-Dec-2025 21:58            15209006
henikoffcutnrunbiorep1.moreThan150_treat_pileup.bw 15-Dec-2025 21:58            13420906
henikoffcutnrunbiorep2.lessThan120_treat_pileup.bw 15-Dec-2025 21:58             8927713
henikoffcutnrunbiorep2.lessThan150_treat_pileup.bw 15-Dec-2025 21:58            10325495
henikoffcutnrunbiorep2.moreThan120_treat_pileup.bw 15-Dec-2025 21:58            11503038
henikoffcutnrunbiorep2.moreThan150_treat_pileup.bw 15-Dec-2025 21:58            10106179
notstim_chavez2025_rep1.lessThan120_treat_pileu..> 12-Feb-2026 18:58            19038153
notstim_chavez2025_rep1.moreThan120_treat_pileu..> 12-Feb-2026 18:58            44288951
notstim_chavez2025_rep1_treat_pileup.bw            12-Feb-2026 18:58            57909368
notstim_chavez2025_rep2.lessThan120_treat_pileu..> 12-Feb-2026 18:58            16194873
notstim_chavez2025_rep2.moreThan120_treat_pileu..> 12-Feb-2026 18:58            24916606
notstim_chavez2025_rep2_treat_pileup.bw            12-Feb-2026 18:58            38379604
shimbo2019_hek293T_cutnrun_ctcf.lessThan120_tre..> 26-Jan-2026 01:40            19478161
shimbo2019_hek293T_cutnrun_ctcf.moreThan120_tre..> 26-Jan-2026 01:40           355520196
shimbo2019_hek293T_cutnrun_ctcf.multi.bam.lessT..> 26-Jan-2026 01:39            23327288
shimbo2019_hek293T_cutnrun_ctcf.multi.bam.moreT..> 26-Jan-2026 01:39           391928092
shimbo2019_hek293T_cutnrun_ctcf.multi_treat_pil..> 26-Jan-2026 01:39           411734171
shimbo2019_hek293T_cutnrun_ctcf_treat_pileup.bw    26-Jan-2026 01:41           373638110
skeneandhenikoff2017_k562_cutnrun_ctcf_10.lessT..> 26-Jan-2026 01:41             9952456
skeneandhenikoff2017_k562_cutnrun_ctcf_10.moreT..> 26-Jan-2026 01:41           102595029
skeneandhenikoff2017_k562_cutnrun_ctcf_10.multi..> 26-Jan-2026 01:39            11302402
skeneandhenikoff2017_k562_cutnrun_ctcf_10.multi..> 26-Jan-2026 01:39           112803683
skeneandhenikoff2017_k562_cutnrun_ctcf_10.multi..> 26-Jan-2026 01:39           119273593
skeneandhenikoff2017_k562_cutnrun_ctcf_10_treat..> 26-Jan-2026 01:41           108216801
skeneandhenikoff2017_k562_cutnrun_ctcf_2.5.less..> 26-Jan-2026 01:41            11199407
skeneandhenikoff2017_k562_cutnrun_ctcf_2.5.more..> 26-Jan-2026 01:41           111255624
skeneandhenikoff2017_k562_cutnrun_ctcf_2.5.mult..> 26-Jan-2026 01:39            12505407
skeneandhenikoff2017_k562_cutnrun_ctcf_2.5.mult..> 26-Jan-2026 01:39           121197238
skeneandhenikoff2017_k562_cutnrun_ctcf_2.5.mult..> 26-Jan-2026 01:39           129736362
skeneandhenikoff2017_k562_cutnrun_ctcf_2.5_trea..> 26-Jan-2026 01:41           119740632